Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917043.1_cds_XP_016466687.1_59517
CDS Infomation

[gene=LOC107789406] [db_xref=GeneID:107789406] [protein=acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like] [protein_id=XP_016466687.1] [location=complement(join(49311..50438,50512..50589,50922..50990,51072..51123,51911..52065,52147..52261,52375..52535,52675..52782,53678..53752,53848..54189))] [gbkey=CDS]
Sequence

ATGGCTTCAACTTCACATCCTCCCGTGGCATTCAGTGGAAGTTTGGCTTCTAAAACTTCG
GCTTCAGACCTTCTTCGTAGCTCAAGAAATGGTGTCTGCGGTGTGCCATTGAAAGCCCTC
GGCAGAGCACGATTGGGTTCTAAAAAGAGAGATTTTGCCGTCTCTGCTAAGGTTCGAAAG
GTAAAGAAGCACGAGTATCCTTGGCCAGAGGATCCTGACCTTAATGTCAAGGGTGGAGTC
CTCAGTCATTTATCACCTTTCAAGCCATTGAAAGAAAAGCAAAAGCCGGTGACATTGGAT
TTTGAGAAACCTCTTATGGATCTGCAGAAGAAAATCATTGACGTTCAAAAGATGGCAAAT
GAAACTGGATTGGATTTCAGTGACCAAATTATCTCCCTCGAGAACAAATACCAACAGGCT
CTAAAAGATCTTTACACGCATCTGACTCCTATACAAAGAGTGAATATTGCAAGGCATCCT
AACAGGCCAACTTTCCTTGATCACATCTTTAATATTACTGAGAAGTTTGTGGAGCTTCAT
GGTGACCGAGCTGGGTATGACGATCCTGCCATTGTCACTGGCCTTGGCACAATAAATGGT
AGAAGCTATATGTTCATGGGTCATCAAAAAGGACGCAACACAAAGGAGAACATACAACGT
AACTTTGGGATGCCTACGCCGCATGGCTATAGGAAAGCTCTGCGAATGATGTACTATGCT
GATCATCACGGATTCCCGATTATCACCTTCATTGACACACCAGGGGCATATGCTGACCTT
AAATCGGAGGAACTAGGCCAAGGGGAAGCCATAGCTCATAACTTGAGGACTATGTTTGGT
TTGAAAGTACCAATTATTTCCATTGTTATGGGAGAAGGGGGTTCTGGTGGAGCTCTGGCT
ATTGGTTGTGCTAATAAATTGTTAATGCTTGAAAATGCTGTCTTCTATGTTGCCAGCCCA
GAAGCATGTGCAGCAATTTTATGGAAGACCGCAAAAGCTTCTCCTAAGGCAGCTGAGAAA
CTCAAGATAACTGCTCGAGAGCTGTGCAAGCTTCAAATTGCTGATGGTTCCATTGCTGAG
CCTCTTGGTGGTGCACATGCTGATCCATATTGGACTTCACAGCAGATAAAAACTGCAATT
GAAGAATCAATGGATGAACTTACGAAAATGGACACTCAAGAGTTGTTAAGGCACAGGATG
CTTAAGTTCCGAAAACTGGGTGGCTTCCAGGAGGGAGTTCCCATTGATCCAAAAAGGAAG
GTCAACATGAAAAAGAAAGAAGAACCTCTTCTTCCACCTGGGACTCCGGATGTGGAGTTA
ATGGATGAGGTTGAAAAGTTAAAGCAAGAGATCCTGAAAGCAAAGGAATCATCCGGGAAG
ATTCCAGAGTCAGGCCTGAATGAGATGATAGAAAAATTGAGAAGGGAAATTGATTATGAA
TTTTCTGAGGCTGCTAAAGCTTTAGGTTTGGAGGAAAAGTTTGTCATAGTGCGAGAAGAA
TTTGCAAAAACAAGGAACTCAAACGACCAGTCAATGCATCCTGCTCTGAAGGAAAAGCTT
GACCAGCTTAAGGATGAATTCAACAGAAACATGTCTGCTGCTCCAAATTATGCTAGTCTA
AAGAATAAGCTTGAGATGTTACAAGAAATGTCTGAAGCCCACAAACTCTCCGAGAAAAAT
AGCAAGGCAAACAAAATGAAGGAGGAGATCAATAAGAGGTTAAAAGAAACCATGAATCGC
CCTGATTTGAAGGAGAAGATTGATAAATTGAAGGCTGAAATCGAGAGTACTGGGGTATCA
ACAGTTATGGATTTAGACCAGGGGCTAAAGGAGAAAATTGTGCAACTTAAAGATGAAATG
GAGACGGAATTTGCTGGCATTTTTGAATCTTTAGGTTTGCATGTCAGCCCACCATCACTT
CCTGATGCCAAGAGAAAAATTGATGAATTTAACAATGAAATTACCAAGGTTATGGAAGAC
GTCGTGAATTCGACAGATTTGAAAAACAAGATTGAGTTGTTAAAAATGGAGGTAGCAAAG
GCTGGAAAGATAGCAGATGCAGAGTCAAAGGCAAAAATTCAGGCCTTAGAACAGCAAATA
AAGCAGAGTCTTGCAGAGGCTATGAGTTTCCCTGAGTTGAAAGAAAAACATGAGAAGCTG
AAGGCAGAGATTATTGAAACTGTTGAATCCCCTGAAGGATCTAACGGAAGTTTGCTCGCA
GATAATGATGGTTCTAAGGCAGAAGTAGAAGTTAATGTAGATGCAAACCGTAGCTTTGCA
TGA

Peptide Sequence

PEP ID

XP_016466687.1
PEP Infomation

PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Nicotiana tabacum]
Sequence

MASTSHPPVAFSGSLASKTSASDLLRSSRNGVCGVPLKALGRARLGSKKRDFAVSAKVRK
VKKHEYPWPEDPDLNVKGGVLSHLSPFKPLKEKQKPVTLDFEKPLMDLQKKIIDVQKMAN
ETGLDFSDQIISLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHIFNITEKFVELH
GDRAGYDDPAIVTGLGTINGRSYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYA
DHHGFPIITFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVMGEGGSGGALA
IGCANKLLMLENAVFYVASPEACAAILWKTAKASPKAAEKLKITARELCKLQIADGSIAE
PLGGAHADPYWTSQQIKTAIEESMDELTKMDTQELLRHRMLKFRKLGGFQEGVPIDPKRK
VNMKKKEEPLLPPGTPDVELMDEVEKLKQEILKAKESSGKIPESGLNEMIEKLRREIDYE
FSEAAKALGLEEKFVIVREEFAKTRNSNDQSMHPALKEKLDQLKDEFNRNMSAAPNYASL
KNKLEMLQEMSEAHKLSEKNSKANKMKEEINKRLKETMNRPDLKEKIDKLKAEIESTGVS
TVMDLDQGLKEKIVQLKDEMETEFAGIFESLGLHVSPPSLPDAKRKIDEFNNEITKVMED
VVNSTDLKNKIELLKMEVAKAGKIADAESKAKIQALEQQIKQSLAEAMSFPELKEKHEKL
KAEIIETVESPEGSNGSLLADNDGSKAEVEVNVDANRSFA

Transcript Sequence

Gene sequence data has not been registered.